BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A03SP1|AL427410
(754 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1798 1459 0.0
>3x_Contig1798
Length = 38968
Score = 1459 bits (732), Expect = 0.0
Identities = 747/755 (98%), Gaps = 1/755 (0%)
Strand = Plus / Minus
Query: 1 aaaycttcttctaactctgggttgggtactttttcaattttttcatccaccactaaattt 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9255 aaatcttcttctaactctgggttgggtactttttcaattttttcatccaccactaaattt 9196
Query: 61 tctgtgtctttgatcgthaatggaataactttttgcacttgaccaacatgtcctctgama 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9195 tctgtgtctttgatcgttaatggaataactttttgcacttgaccaacatgtcctctgaaa 9136
Query: 121 actttaatacacgaattagtacggatatcccacattcttaatgttttgtcgtcactggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9135 actttaatacacgaattagtacggatatcccacattcttaatgttttgtcgtcactggaa 9076
Query: 181 ctgtaacaagtsaaactttttggatgtagtttaacacagttgacccattccgtatggccc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9075 ctgtaacaagtgaaactttttggatgtagtttaacacagttgacccattccgtatggccc 9016
Query: 241 cgcaacgtataacaagtcctagattcaacatgccacactttaactgttttatcagcagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9015 cgcaacgtataacaagtcctagattcaacatgccacactttaactgttttatcagcagaa 8956
Query: 301 gcactcacaatgatttttttgtatgaatccaccgatagcacagaatcctggtggcctcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8955 gcactcacaatgatttttttgtatgaatccaccgatagcacagaatcctggtggcctcta 8896
Query: 361 taagtygatatacaggaccctgtaatgtagttccatactctgattgtcttgtctaaagaa 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8895 taagttgatatacaggaccctgtaatgtagttccatactctgattgtcttgtctaaagaa 8836
Query: 421 gctgtnatcattttctgatcatcaaaataaatacccttcacaccatccgtgtgcccggtg 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8835 gctgtgatcattttctgatcatcaaaataaatacccttcacaccatccgtgtgcccggtg 8776
Query: 481 agtcttctaatcaaattaccagattttgtgtcccatatagccaccgttgaatcgtatgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8775 agtcttctaatcaaattaccagattttgtgtcccatatagccaccgttgaatcgtatgac 8716
Query: 541 ccagtgaaaagcagtctgtggttgaactttaatgacaataccccatccatatggcctttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8715 ccagtgaaaagcagtctgtggttgaactttaatgacaataccccatccatatggcctttg 8656
Query: 601 aagagctgaattctacatcttccatttctccaattggattccacttggaaccgttcccta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8655 aagagctgaattctacatcttccatttctccaattggattccacttggaaccgttcccta 8596
Query: 661 tatattactttccagggtctcgtatagtacctgctattcctagccctagcggcaacagtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8595 tatattactttccagggtctcgtatagtacctgctattcctagccctagcggcaacagtt 8536
Query: 721 tggttgggagagttgcca-gattkattagtgactt 754
|||||||||||||||||| |||| |||||||||||
Sbjct: 8535 tggttgggagagttgccaggattgattagtgactt 8501
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4747
Number of Sequences: 1807
Number of extensions: 4747
Number of successful extensions: 120
Number of sequences better than 1.0e-20: 1
length of query: 754
length of database: 10,358,551
effective HSP length: 16
effective length of query: 738
effective length of database: 10,329,639
effective search space: 7623273582
effective search space used: 7623273582
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)